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OK, now I see your issue. For some reason, QB has seen fit to allow 'Track Expenses by Job' with every other Payroll Item except the Deduction item. If I were you I'd use an Addition item instead, linking it to the G/L account you want, making it applicable to net pay only, and reverse the sign (+/-) in the entry. Then it will be classified like all the other item types.
I think this is definitely an issue for QB to fix . . . it makes no sense to allow Job/Class tracking on every single Payroll item type except the Deduction item. You shouldn't have to do it this way, but it is a workaround and will get you what you want.