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Dwayne
QuickBooks Team

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Hey Kallison, the deposits that hit your bank account are going to be minus fees (for Square), so your best bet would be to import the sales data from Square. That will give you a full sale amounts and fee amounts. Some processors deposit the full amount and deduct the fees from your bank account, but Square just deposits the net amount. The Square app can help bring over the fees, but you still wouldn't be able to apply that to an invoice created in QuickBooks. I hope that gives you some more insight into what's going on. 

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