Thanks for getting back to us, @Bones.
Let's run a couple of utility tools first to get General Ledger report sorted in numeric order.
Since you already re-sort the Chart of Accounts, let's run verify and rebuild data to get this fix.
To run Verify Data utility:
Here’s how to run the Rebuild utility:
For additional troubleshooting steps, please refer to this article: Resolve Data Damage on your Company File.
After verifying and rebuilding the data, you can re-sort you Chart of Accounts again and check your General Ledger report to double check. You may find this article helpful: Re-sort Lists.
Please keep me posted on how things go with this. I'm here anytime you need further help with the General Ledger report.