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Preparing for Single Touch Payroll (STP) Phase 2

SOLVEDby QuickBooks11Updated September 15, 2023

Before Single Touch Payroll (STP) Phase 2 commences, here are some key points to help you prepare for the changes.

What's not changing?

  • The way you lodge pay and update events
  • The due date for lodging events
  • The types of payments that are needed
  • Tax and super obligations
  • End of financial year finalisation event requirements

What is changing?

The biggest change brought about by STP Phase 2 is additional reporting requirements of employee and earnings data, so data regarding employer and employee interactions between the ATO and other government agencies are more streamlined, and admin tasks associated with hiring and terminating employees is reduced.

Here are the key reporting changes:

  • Disaggregation of gross income amounts
  • Employment and taxation conditions
  • Child support garnishees/deductions
  • Income types and country codes

Disaggregation of gross income amounts

In Phase 1 of STP, Year-to-date gross income amounts were reported to the ATO via pay and update events. Phase 2 extends the use of this data to other government agencies such as the Department of Social Services, Services Australia (Child Support and Centrelink), and the Department of Veterans' Affairs.

Because these agencies assess income differently, the disaggregation (separate itemisation) of gross income amounts will provide more accurate and relevant employment income information to them. Also, social services agencies have specific fortnightly instalment periods whereby applicants must declare their income and period that welfare payments are made. This change will increase accuracy and ensure they receive the right payment at the right time.

The following components of gross earnings will be disaggregated:

  • Allowances
  • Bonuses and commissions
  • Directors' fees
  • Overtime
  • Paid leave
  • Salary sacrifice - In Phase 1, salary sacrifice amounts were not required to be reported. Now in Phase 2, it is a requirement, and the gross amount reported will be the pre-sacrificed amount.

Review pay category payment classification mappings

The following pay categories have been mapped to their respective payment classification by the system:

  • Annual Leave Taken -> mapped to Leave - other paid leave
  • Bonus -> mapped to Bonuses and commissions
  • Casual - Overtime x 125% -> mapped to Overtime
  • Casual - Overtime x 75% -> mapped to Overtime
  • Community Service Leave Taken > mapped to Leave - ancillary and defence leave
  • Compassionate Leave Taken -> mapped to Leave - other paid leave
  • Long Service Leave Taken -> mapped to Leave - other paid leave
  • Permanent - Overtime x 100% -> mapped to Overtime
  • Permanent - Overtime x 50% -> mapped to Overtime
  • Personal/Carer's Leave Taken -> mapped to Leave - other paid leave. 

If you have installed a pre-built Award, download the newest update from the Payroll Settings section to get the classification applied to the Award pay categories.

If you have created your own pay categories, you will need to manually assess and assign the right payment classification to each category by 1 January 2022.

A list of the pre-defined payment classification options are as follows:

  • Default: Assign this classification if the pay category does not fall into any other definition provided below. 
  • Allowance - award transport payments: This is a deductible expense allowance for the total rate specified in an industrial instrument to cover the cost of transport (excluding travel or cents per kilometre reported as other separately itemised allowances) for business purposes, as defined in section 900-220 of the Income Tax Assessment Act 1997.
  • Allowance - cents per km: This is a deductible expense allowance that defines a set rate for each kilometre travelled for business purposes that represents the vehicle running costs, including registration, fuel, servicing, insurance and depreciation into account. This should not include any cents per kilometre allowances that are paid for travel between an employee's home and place of work unless it is a home-based business and the trip was for business purposes.
  • Allowance - laundry: This is a deductible expense allowance for washing, drying and/or ironing uniforms required for business purposes. This allowance is typically paid as a regular rate for each week of work or services performed and cannot include dry cleaning expenses or reimbursements. Uniforms refers to the approved categories of clothing defined by the ATO.
  • Allowance - other: This is any expense allowance not specifically addressed in any other allowance category (such as a car allowance - other than cents per kilometre - and uniform allowance) and/or for those expenses relating to private use (such as cents per kilometre for travel between home and work and laundry allowance for conventional clothing). Pay categories pertaining to JobKeeper and JobMaker should also remain classified as this allowance type. 
  • Allowance - overtime meal: This is a deductible expense allowance defined in an industrial instrument that is in excess of the ATO reasonable amount, paid to compensate the employee for meals consumed during meal breaks connected with overtime worked.
  • Allowance - qualifications/certificates: This is a deductible expense allowance that is paid for maintaining a qualification that is evidenced by a certificate, licence or similar. For example,  allowances to cover registration fees, insurance, licence fees, etc that are expected to be expended to maintain a requirement of the job. This is a new payment classification introduced for Phase 2 reporting.
  • Allowance - tasks: This is a service allowance that is paid to an employee to compensate for specific tasks or activities performed that involve additional responsibilities, inconvenience or efforts above the base rate of pay. For example, higher duties allowance, confined spaces allowance, dirty work, height money, first aid, etc. This is a new payment classification introduced for Phase 2 reporting.
  • Allowance - tool: This is a deductible expense allowance to compensate an employee who is required to provide their own tools or equipment to perform work or services for the employer. For example, chef’s knives, divers’ tanks, trade tools, phone allowances. This is a new payment classification introduced for Phase 2 reporting.
  • Allowance - travel: This is a deductible expense allowance that is in excess of the ATO reasonable allowances amount (for domestic or overseas travel), undertaken for business purposes, which are intended to compensate employees who are required to sleep away from home. It is not a reimbursement of actual expenses, but a reasonable estimate to cover costs including meals, accommodation and incidental expenses. 
  • Bonuses and commissions: Bonuses and commissions are typically paid as lump sum payments rather than at each regular pay period. Bonuses are usually paid to an employee in recognition of performance or services and may not be related to a particular period of work performed. Commissions are usually paid to an employee in recognition of performance or services and may be calculated as a portion of the proceeds or volume of sales. If a bonus or commission is paid in respect of overtime, this should be classified as "Overtime". This is a new payment classification introduced for Phase 2 reporting.
  • Community Development Employment Projects (CDEP) payments: This relates to the wages of employees working under the CDEP scheme. The CDEP scheme has now ceased, but support arrangements are in place that require those remaining members of the scheme to be supported for the duration of its operation. There should not, however, be any earnings reported under this payment classification in Phase 2 and will result in a validation error, preventing the lodgement of an STP event.
  • Directors’ fees: These are payments to the director of a company or to a person who performs the duties of a director of the company. Directors’ fees may include payment to cover travelling costs, costs associated with attending meetings and other expenses incurred in the position of a company director. This is a new payment classification introduced for Phase 2 reporting.
  • ETP (Death benefit) - Code B: This is a multiple payment for a death benefit ETP code N for the same deceased person, where the later payment is paid in a subsequent financial year from the original code N payment. 
  • ETP (Death benefit) - Code D: This is a death benefit payment directly to a dependant of the deceased employee. A dependant may include a spouse of the deceased, a minor child, a person who had an interdependency relationship with the deceased or a person who was a dependant of the deceased just before the latter died.
  • ETP (Death benefit) - Code N: This is a death benefit payment directly to a non-dependant of the deceased employee. A non-dependant is a person who is not a dependant of the deceased and not a trustee of the deceased estate.
  • ETP (Death benefit) - Code T: This a death benefit payment directly to a trustee of the deceased estate. This person may be an executor or administrator who has been granted probate or letters of administration by a court.
  • ETP (Life benefit) - Code O: This is a life benefit payment as a consequence of employment, paid for reasons other than those provided in "ETP (Life benefit) - Code R". Examples include an ex-gratia payment, gratuity or golden handshake, non-genuine redundancy payments, payments in lieu of notice and some types of unused leave, under specific circumstances. This is the non-excluded part of the ETP.
  • ETP (Life benefit) - Code R: This is a life benefit payment as a consequence of employment, paid only for reasons of genuine redundancy (ie, where the employer decides the job no longer exists), invalidity (the employee sustained a permanent disability), early retirement scheme (an ATO-approved plan that offers employees incentives to retire early or resign when the employer is rationalising or reorganising their business operations) or compensation for personal injury, unfair dismissal, harassment or discrimination. This is the excluded part of the ETP.
  • ETP (Multiple payments) - Code P: This is a multiple payment for life benefit ETP code O for the same termination of employment, where the later payment is paid in a subsequent financial year from the original code O payment. This is the non-excluded part of the ETP.
  • ETP (Multiple payments) - Code S: This is a multiple payment for life benefit ETP code R for the same termination of employment, where the later payment is paid in a subsequent financial year from the original code R payment. This is the excluded part of the ETP.
  • Exclude from payment summary (income statement): Assign this classification to any payments made to an employee that are not to reported to the ATO and therefore not displayed on an employee's income statement. Examples include award overtime meal allowances and  domestic or overseas travel allowances up to the reasonable allowances amount. 
  • Exempt foreign employment income: These are earnings paid to an Australian resident, for tax purposes, who work in another country for 91 days or more for a continuous period and the income is subject to tax in that country. The foreign income may be exempt from tax if the foreign service is attributable to any one of the following:
    • Non-government agency workers delivering Australian Official development assistance; 
    • Operating a public fund declared by the Minister to be a developing country relief fund;
    • Operating a public fund established and maintained to provide monetary relief to people in a developed foreign country impacted by a disaster (a public disaster relief fund);
    • Prescribed charitable or religious institution exempt from Australian income tax because it’s located outside Australia, or the institution is pursuing objectives outside Australia;
    • Deployment outside Australia by an Australian government (or authority) as a member of a disciplined force.
  • Leave - ancillary and defence leave: Paid leave for absences such as for Australian Defence Force, emergency leave, eligible community service and jury service. This is a new payment classification introduced for Phase 2 reporting.
  • Leave - cash out of leave in service: Leave entitlement earnings that have been paid out in lieu of the employee taking the absence from work. This option represents Fair Work entitlements as defined in an award, enterprise agreement or contract of employment (for award and agreement free employees). When leave is cashed out, it reduces the balance of the entitlement, as occurs if the absence was taken, but on the date of payment rather than over the duration of the absence. This is a new payment classification introduced for Phase 2 reporting.
  • Leave - other paid leave: All other paid absences not otherwise covered in the other leave payment classifications and regardless of rate of pay (full, half, reduced rate) must be reported under this payment classification. Examples include, but are not limited to: annual leave, leave loading, long service leave, personal leave, RDOs. This is a new payment classification introduced for Phase 2 reporting.
  • Leave - paid parental leave: Some employers offer paid parental leave and the Government Paid Parental Leave (GPPL) Scheme offers eligible employees, who are the primary carer of a newborn or adopted child, up to 18 weeks’ leave, paid at the national minimum wage. Generally, GPPL is paid by Services Australia to the employer to pay the employee, but both types of paid parental leave may be paid at the same time. This is a new payment classification introduced for Phase 2 reporting.
  • Leave - unused leave on termination: Any leave balances paid out on termination that are otherwise not deemed an ETP or lump sum payment. This is a new payment classification introduced for Phase 2 reporting.
  • Leave - worker's compensation: Any workers’ compensation payments received by an injured employee for the hours not worked, or not attending work as required, or if the employment has been terminated. This is a new payment classification introduced for Phase 2 reporting.
  • Lump Sum A (Type R): All unused annual leave or annual leave loading, and that component of long service leave that accrued from 16/08/1978, that is paid out on termination only for genuine redundancy, invalidity or early retirement scheme reasons. 
  • Lump Sum A (Type T): Unused annual leave or annual leave loading that accrued before 17/08/1993, and long service leave accrued between 16/08/1978 and 17/08/1993, that is paid out on termination for normal termination (that is, other than for a genuine redundancy, invalidity or early retirement scheme reason). 
  • Lump Sum B: Long service leave that accrued prior to 16/08/1978 that is paid out on termination, regardless of the reason for such termination. 
  • Lump Sum D: This represents the tax-free amount of a genuine redundancy payment or early retirement scheme payment, up to the limit, based on the employee's years of service. 
  • Lump Sum E: This represents the amount for back payment of remuneration that accrued, or was payable, more than 12 months before the date of payment and is greater than the lump sum E threshold amount, being $1,200. 
  • Overtime: This represents a payment made to an employee that works extra time. It can include work done beyond their ordinary hours of work, outside the agreed number of hours or outside the spread of ordinary hours (the times of the day ordinary hours can be worked). This is a new payment classification introduced for Phase 2 reporting.
  • Return to work payment: This represents an amount paid to induce an employee to resume work, such as to end industrial action or to leave another employer. It does not matter how the payments are described or paid, or by whom they are paid. This is a new payment classification introduced for Phase 2 reporting.

To update the payment classification for a pay category:

  1. Select Payroll, then select Payroll Settings.
  2. Select Pay Categories under Pay Run Settings.
  3. Select the pay category to update, then navigate to the Payment classification dropdown menu and select the relevant payment classification.

Review leave category payment setup

As part of transitioning to Phase 2, any paid leave taken by an employee needs to be correctly reported against a specific leave pay category that is mapped to a relevant leave-related payment classification.

Each leave category contains a payment setup option of any of the following:

  • Basic
  • Don't pay for leave taken
  • Report the earnings for the leave taken against another pay category
  • Custom

To check the payment setup of each leave category:

  1. Select Payroll, then select Payroll Settings.
  2. Select Leave Categories under Pay Run Settings.
  3. Select the leave category and navigate to the payment setup.

You may need to change settings depending on the type of leave payment setup:

Basic

If your leave category is set to Basic, you will need to change this to Report the earnings for the leave taken against another pay category option, and choose the pay category associated with that leave (e.g. Annual Leave Taken for the Annual Leave category). This is because the Basic payment setup records leave against the primary pay category, e.g. Permanent Ordinary Hours, and as such will not itemise properly.

Report the earnings for the leave taken against another pay category

If your leave category is set to this, we recommend reviewing that the associated pay category is relevant to the leave payment classification. E.g. if you have jury service leave and paid parental leave and annual leave reported against one 'all in one' leave taken pay category, you will need to change all 3 leave types to be reported against separate payment classifications.

You may need to create new 'leave taken' pay categories for different leave categories, e.g. in the above example, a 'jury leave taken'. 'paid parental leave taken' and 'annual leave taken' pay category. Learn how to create a new pay category here.

Custom

This setting allows you to transfer leave hours to a specific pay category. Without wanting to assume that users have chosen to transfer leave hours to a specific leave pay category, we will just clarify here that that's exactly what should be done. By doing this, all you then need to do is ensure the leave pay category is mapped to the correct payment classification as per Phase 2 requirements.

Notes:

  • For termination payouts, excluding death benefits, we have system pay categories that are automatically assigned in the pay run to the leave payout earnings - these will automatically be mapped to the correct payment classifications.
  • For a while now, any new business created has a default set of leave categories that are automatically mapped to their associated leave pay categories. For new businesses created and any existing businesses that have retained these mappings, the associated leave pay categories will be automatically mapped to the correct payment classifications from 9 November 2021.

Assign new classifications to salary sacrifice deduction categories

Since STP Phase 2 requires salary sacrifice amounts to be itemised, there will be 2 new payment classification options in the Deduction category settings:

  • Salary sacrifice (superannuation) - An effective salary sacrifice arrangement, entered into before the work is performed, where contributions are paid to a complying superannuation fund, whereby the sacrificed salary is permanently foregone.
  • Salary sacrifice (other employee benefits) - An effective salary sacrifice arrangement, entered into before the work is performed, for benefits other than for superannuation, where the sacrificed salary is permanently foregone, e.g. novated lease, gym membership, workplace giving donations, car, property (goods, land, buildings, shares and bonds), expense payments (loans, school fees, childcare costs and home phone costs) and work-related items such as portable electronic devices and equipment.

Both deduction classifications have been automatically assigned by the system - no action needed.

If you have created custom salary sacrifice deduction categories, however, ensure that they are manually mapped to the Salary sacrifice (other employee benefits) classification.

Employment and taxation conditions

The following information will be required to be reported in STP Phase 2:

  • Employee commencement date (already reported in Phase 1)
  • Employee termination date (already reported in Phase 1)
  • Employment basis (new requirement)
  • Termination reason (new requirement)
  • Tax treatment (new requirement)

This means employers will no longer need to send TFN Declarations to the ATO or provide employment separation certificates when an employee ceases employment, as this information will now be submitted through STP instead.

Important Note:

  • New employees will still need to complete a TFN declaration and the employer must retain this for their records. They will not have to lodge/post/upload the declaration to the ATO.
  • Existing employees do not need to complete new TFN declarations to start reporting through Phase 2.

Review termination details for any employee terminated in the 21/22 Financial Year

Ensure that any employees terminated in the 21/22 FY have a reason for termination recorded, especially if they were terminated between 1 June 2021 and 19 Oct 2021 (when termination reason was made mandatory in the system).

If there was no reason recording, any STP event containing that employee will fail validation and you will have to update this information.

To check and update any terminated employee's termination reason:

  1. Select Payroll, then select the arrow next to Add Employee.
  2. Select Export Employees.
  3. Under Data type, select Template with employee data (including terminated employees, then select Download.
  4. In Excel, filter the data so that only employees with a date of 1/7/21 or later in the EndDate column.
  5. Identify the employees with blank data in the TerminationReason column, then select a termination reason from the cell dropdown. Repeat for every affected terminated employee.
  6. Save the spreadsheet and select Import on the top right corner of the Export Employees screen. Then, upload the file back into the system.

Review employees' tax status

There will be 2 new sections in the employees' Tax File Declaration section:

  • STP tax category
  • Medicare levy

Check these settings and ensure each employee has the relevant settings applied to them.

Audit invalid tax file numbers

If an employee has the option the employee quoted an invalid TFN, the corresponding TFN number that is entered in the Tax file number screen (987-654-321) will become invalid in STP Phase 2. This number will be updated to 000-000-000 so that it will be treated as if the employee didn't quote a TFN.

Child support garnishees/deductions

STP Phase 2 has introduced the ability to report on child support garnishees and deductions through STP. Reporting through STP will remove the need for employers to provide separate remittance advice to the Child Support Registrar. However, you must still pay the required amounts directly to them by the date specified in your notice.

Please note that reporting on child support through STP is voluntary. If you choose to not report through STP then there is no preparation required to be Phase 2 ready in this area. To be clear though, employers will still need to report directly to the Child Support Registrar on an ongoing basis. 

If you do choose to report child support deductions and garnishees through STP, you will need to assign the applicable child support classification against the relevant child support deduction category.

Income types and country codes

Another new requirement being introduced in Phase 2 is reporting an income type for each payment made to an employee and, in some cases, a country code alongside that income type.

The 3 main drivers of reporting income types and country codes are as follows:

  • To identify amounts with specific tax consequences and/or mapping to a specific part of an individual's income tax return.
  • To easily identify any payers choosing to claim an STP reporting concession, such as a reporting concession for closely held payees, which avoids the ATO unnecessarily contacting the payer to follow up with them.
  • Clarifies the employer's reporting obligations with respect to foreign tax and whether there are any applicable tax treaties in place with a foreign country.

Review income type definitions

To facilitate this change in STP Phase 2, the STP income types section has been added to the employee's Pay Run Defaults section. For applicable employees, ensure you have selected the correct income type here.

Note: existing employees already classified as closely held in the platform will not be required to be reconfigured. The closely held setting has been consolidated with other income type settings in the employee 'Pay Run Defaults' screen and the existing employee configuration will be retained when the new settings are made available.

Obtain visa country of existing working holiday makers

When reporting working holiday makers through STP Phase 2, the visa country of the working holiday maker will also need to be reported:

  1. Select Payroll, then select the employee's name.
  2. Select Tax File Declaration
  3. Untick the Is approved working holiday maker box, then re-tick it. It will ask you to select the Visa country of the employee's visa.
  4. Select Save.

It would be worth making note of the visa country for each working holiday maker so that when the new country code setting is made available, users will be able to commence updating this information immediately without any impact to Phase 1 reporting.

Review locations assigned to foreign employment employees

Employees classified with an income type of foreign employment will also be required to report on the host country where the employee is working.

This will be configured through locations to cater for potential multi-country work. This will allow us to report the earnings paid to employees against the country of the location such earnings have been allocated to.

As such, and only for businesses with foreign employment income type employees, we strongly suggest reviewing the location set up in the business and make sure that:

  • separate locations are set up for each non-AU country where employees work
  • non-AU locations are separated by country, for eg if there is an employee working in Greece and another employee working in Italy, a location per country (as a minimum) should be set up
  • foreign employment income type employees are assigned a primary location that is specific to the country they work in and, if such employees are required to submit timesheets, they are submitting timesheets for locations specific to the country of work

The above rules will ensure that, when reporting earnings for foreign employment income type employees, the country code will be reported as per Phase 2 requirements.  

Do I need to do anything before lodging STP Phase 2 events?

Once you've set up your payroll and before you begin lodging pay events under STP Phase 2, please ensure you have created and lodged an Update Event so the ATO can validate the data that will be transitioned over to STP Phase 2.

Content sourced from Employment Hero

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