This article is for small businesses that are not yet eligible for Making Tax Digital (MTD). Find out whether you're eligible here or if you've already signed up for MTD, go to submit a VAT return to HMRC. All eligible UK VAT-registered businesses will have to keep their financial records in a digital form and submit their VAT returns using MTD-compliant software.
Note: XML Submissions (which are non-MTD submissions) are no longer supported in QuickBooks Online. As part of the 2020/21 tax year changes, HMRC have made the decision to discontinue XML submissions as of Thursday 8 April, 2021. This means that any VAT-registered customer not yet signed up to MTD will be unable to submit XML returns via QuickBooks Online.
If you're on the Flat Rate Scheme or submit your VAT annually and haven't signed up for MTD, you'll need to file through the HMRC Government Gateway. Once you've filed through the gateway, go to Mark your VAT as filed in QuickBooks to close the period.
You can now close the books to protect transactions entered in the quarter you just filed.
Once you've paid off the liability to HMRC, you can record a VAT payment or refund.