Thanks for joining the Community, @JaneC13.
I'd be happy to help share some insights about paying VAT.
You can record the separate VAT payment same as the normal VAT payment process in QuickBooks.
Here's how:
- Go to Taxes and click on Record Payment for the specific VAT period you need.
- At the top, select the bank account you've used to pay HMRC.
- Make sure you've selected Payment under Payment Type.
- Enter the Payment date and amount.
- Add a memo if needed.
- Click Save.
That should do it. For other articles related to VAT that you can use in the future, you can check this link: VAT for QuickBooks Online.
Keep me posted if you have other questions about VAT payment. I'm here to help.