I'm here to give steps to help you record the payment, Mel_912.
You'll want to re-create the payment that was deleted by following these steps:
- Go to the Vendors > Pay Bills.
- If you use more than 1 Accounts Payable account, select the appropriate one from the A/P Account drop-down.
- Put a check mark on the bill you want to pay..
- Select the payment date and payment method. Click Pay Selected Bills.
- Hit Done when the Payment Summary window appears.
I've got this article for more information: Pay bills in QuickBooks Desktop.
Once done, you can reconcile the account again by going to Banking > Reconcile. You can use this article as a guide: Reconcile an account in QuickBooks Desktop.
For additional questions about reconciling the account or other concerns with QuickBooks, please let me know in the comments. Thanks.