Can I set up the 1st paycheck to include the 2 days from the prior pay period with the current pay period (paid twice a month)?

Thanks for checking in with us, maryann4.

Yes, you can as long as we choose the correct check date when creating a paycheck. QuickBooks Online (QBO) will base the pay date for the taxes and not for the pay period. For more details about this one, just check out this article: Understanding the Doctrine of Constructive Receipt.

Then, follow the steps below to run a payroll for your employee:

1. Go to Workers on the left side menu.
2. Choose Employees.
3. Select Run Payroll.
4. If you have more than one payroll schedule, choose a schedule and tap Continue.
5. Choose the employees you'd like to pay.
6. Enter the hours and memos.
7. Press Preview payroll details or Submit payroll.
8. Click Finish Payroll.

For more details about this one, please refer to this article: Create paychecks in online payroll. 

I've got a link here where you can find articles about managing your payroll: Pay employees, enter timesheets, and send payroll forms.

I'm just one click away if you need a hand with running payroll reports or any QBO related. I'll be here to ensure your success. Take care always.

Thanks for setting me in the right direction!

I created 2 paychecks 1) for the partial prior pay period and 2) for the current one. I deleted the health ins deduction for the prior period since it didn’t take effect until the beginning of the current period, then added it back for the current pay period.