You can record your state tax payments with credits in your payroll taxes. I'll be happy to help you accomplish this.
But first, you'll have to review and apply your deduction or credits from your payroll settings. Once done, here's how you can record your tax payments:
In addition, here's an article you can read to learn more about recording your tax payments: How to Record a Payroll Tax Payment?
Lastly, you can also read this article which can be your guide for any future tasks: Commonly Used Articles to Get Started with Payroll.
It'll be always my pleasure to help if you have any other questions. I'll be keeping an eye for your response.
Thank you but this isn't exactly what I was looking for.
I ended up stumbling upon the answer myself.
I clicked on the Gear icon
In the MO Withholding Setup box there is a box to click
"check to apply the compensation deduction to tax payments"
Then, when I paid the MO taxes, it will applied the compensation deduction to the payment automatically.