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You can exclude the reimbursement transaction, bethapadron.
That way, it will be eliminated and won't be part of your expenses. You can follow these steps:
I've added these articles to learn more about categories in QuickBooks Self-Employed. I'd also to share the new receipt forwarding feature feature in QBSE. This is very helpful to easily transfer the copy of your receipts into your account.
Keep your posts coming if you have more concerns. Wishing you all the best!