I want to ensure this is taken care of, @hclarke1.
I'd be happy to help you resolve your concern. Before I do, can you elaborate more on your issue on which transactions doubled in the payroll expenses? This way, I can give you the right steps on how to do so.
You can also visit our Help Articles hub for QuickBooks Online in case you need some related references in managing your account and other related transactions.
Feel free to drop a comment below if you have other questions. I'm always here to help.