Fix alert "Some QuickBooks Payments deposits weren't automatically recorded. After you receive the funds in your account, record them manually as a Bank Deposit"

Allow me to jump in and offer my help to clear the alert, andrea1980.

QuickBooks usually adds the deposit automatically if there's a matching invoice or sales receipt. However, the system is unable to do it if the payment is processed in the Merchant Service Center and not in QBO. 

There are also times that cache or browser issues can hide the transaction or show alerts even if no online payment was processed.

I'll share some steps that can resolve some of the most common browser issues in QuickBooks Online.

First, use a private or incognito window and log in to your account. You can also use a different browser such as Mozilla, Google Chrome, or Microsoft Edge. Use these keyboard shortcuts on how to start an incognito browsing session:

• Ctrl + Shift + N  for Google Chrome
• Ctrl + Shift + P for Firefox
• Control + Option +P if you're using Safari
• Ctrl + Shift + P for Microsoft Edge

Second, check if you can still see the alert or the undeposited transaction after logging back in. If everything looks good, follow the steps in this article to delete your browsing history: Clear Cache And Cookies To Fix Issues When Using QuickBooks.

You can also check out this article for more details: Find Missing Payments You Want to Deposit in the Bank Deposit Window.

Additional guidance and information when using QuickBooks Payments are also shared in these articles:

• Recording QuickBooks Payments Bank Deposits FAQs 
• Common Questions About Payments Deposits in QuickBooks Online 

Keep me posted or reply to us if you're able to clear out the alert about the missing deposit. You can also ask follow-up questions if you need anything else. 

Hi @jenop2, thanks for your replay. I tried logging in using the incognito, but the alert still showing up.

I understand what you're going through with the error message you receive from your banking transaction, @. Since you encountered the same issue after following the suggested resolution above, we recommend calling our support team in QuickBooks Online.

Our phone representative will look into the issue and investigate further why you receive this kind of error. They can review your account in a private setting for your safety.

Please check our support hours so you may reach out to us at a time that works for you.

Follow this guide:

1. Log in to your QuickBooks Online account.
2. Click the? Help button at the top right corner.
3. Go to the Search tab, then select Contact Us.
4. Enter a brief conversation about your situation, then click Continue.
5. Choose a way to join us: Get a callback.

Plus, this article will walk you through the process of transaction navigation. See the detailed steps: How to search for transactions in QuickBooks Online.

I appreciate your patience while we are still peeking for remedies. Please know that we are here to support your growing industry. Keep me notified through your email, @andrea1980. Have a wonderful day.