@komatthew
"Since the deposit can from the CD and its going to the CD."
I think you missed this part:
@FishingForAnswers nailed it:
"and a spot to select the account the money is sourced from (Interest Income, probably a column named Account)."
You need to select Interest Income under ACCOUNT (below 'Add funds to this deposit'), not the CD. The CD is selected under Account in the upper-left corner of the deposit screen. If you select the CD under ACCOUNT, it will decrease the CD by $2,194.12, which is what you're seeing.
That will increase the balance in the CD by $2,194.12 and increase your Interest Income by $2,194.12.
