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Hi keating.jan,
Thanks for posting in the Community! Let me provide some information on how to correct the overpayment made on a pay run.
You can either create an ad-hoc pay run to correct the previous pay runs or leave the previous pay run as is and then on the next pay runs you can add a deduction to adjust the employee's earnings.
On the ad-hoc pay run:
Once complete only the adjusted details should be present and if you wish you can now finalise the pay run, create a pay event from it and lodge with the ATO to correct the year-to-date figures.
If you want to add a deduction to the next pay run. Make sure to set up a deduction category to be able to add it on the next pay run. Here's how:
Once you have set up your deduction categories they will now be available to be assigned to employees.
Feel free to comment below if you have more questions about QuickBooks Online Payroll. I'll be here to help you. Have a nice day!
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