I've got you covered, @useruday.
You'll need to enable the TDS for the customer to record it when creating an invoice and receiving the payment. Here's how:
Once it's enabled, QuickBooks will automatically deduct TDS to the invoice based on the amount you enter. Then, receive the payment as usual.
I'm adding this article for more details: How to set up TDS.
You might want to customise your invoices for GST. Here's an article you can read for more guidance: Customise invoice for GST.
Should you need any assistance receiving payments with TDS, I'm available here to help any time!