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Sorry - your question doesn't make a lot of sense.
You can invoice the customer whatever is agreed between you but...
(1) as you're VAT registered, you have no VAT expenses (this is reclaimed from HMRC)
(2) if the customer is outside the UK, they are not liable for UK VAT (other than in some special circumstances)
(3) flights - from memory - are not VATable anyway
Sorry I ran out of space on question.
So i have bought flights for a job which are T0 and some other materials that are T1.
I am a vatable company and an invoicing them now for a deposit to cover these expenses.
Can I invoice them seperately for flights and not charge vat or because I am vat registered, do I have to charge them for VAT on whole invoice. Example below
£5000 Flights
£1000 Materials
Net £6000
Vat £200 (only on materials)
Total £6200
Or does the entire net amount £6000 have to show vat £1200?
There are a lot of ifs, buts & maybes to this. Without knowing exactly what you're doing, where & why, there is no single, simple, answer.
As above, flights are not VATable if you bill them as flights. If you bill them as general expenses, they (could) become VATable but for B2B, if the customer is outside the UK, this would be zero rated anyway.
The goods can only be zero rated if/when they leave the UK.
https://www.gov.uk/guidance/vat-exports-dispatches-and-supplying-goods-abroad#vat-on-exports
Are the goods going to be exported after payment?
If so, the customer will not want to pay UK VAT.
I'd be tempted to raise as two invoices. One for the flights & one for the goods but as you mention that this is a deposit - not a final invoice - you could make the goods invoice a Proforma so that the deposit is simply a payment on account. Raise the final invoice once the goods are ready for export.
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