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Hi -actiontransport, thanks for getting back to us with this additional information
Indirect edits by system administration are normal and show changes made automatically by QuickBooks. These can happen for a number of reasons, including:
With regard to the automated payment, this can happen when the setting to automatically apply credits is turned on. This will apply any unapplied payment/credit note to the next invoice generated for the same customer.
You can check and manage this setting by going to the Gear > Account & settings > Advanced > Automation. If you need further support, we recommend reaching our team by chat messaging or by clicking the Help icon to connect with an expert. The agents available here will have access to set up a remove screen share with you to enable them to view this with you. For more details on how to reach them, click this link: How to get help with QuickBooks.
Thanks again for reaching Intuit QuickBooks Community. Have a great day!