Hi there, @haworthelectrica,
To create CIS invoices in QBO, you must first turn on this feature to calculate your CIS deductions, track your CIS withheld or suffered amounts and create the necessary reports for HMRC.
Here's how:
Next, add a contractor to start processing CIS invoices. Here's how:
For help in creating your CIS transactions and setting them up, click here.
Feel free to connect with me again if you have other questions or needing help with anything in QuickBooks. I'm always here to help when you need further assistance. Have a wonderful day!