Yes, you can run payroll with two different cycles, @sakshic. All you need to do is process your payroll separately for each pay cycle. Let me guide you through the steps.
First, ensure that you have already set up your payroll. Once that's done, follow these steps:
- Go to Payroll and select Employees.
- Click on the Run payroll button.

- Choose a pay cycle and hit Continue to proceed.

After you run the payroll for the first pay cycle, repeat the process for the second pay cycle.
Additionally, I want to share this article to help you generate a payroll report: Create a payroll summary report in QuickBooks.
If you have any further questions or concerns related to payroll, feel free to leave a comment below. The Community is here to help.