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Join nowHello there, @Jon Hunt.
Welcome to the Community. I can help you set up the Subchapter S Corp pay type in your QuickBooks.
After that, automatically this deduction is assigned to you. It won't actually start deducting until it is set up within the employee profile. For more details, I recommend checking this article: Set up and record S-Corp health insurance. Please follow the steps for Intuit Online Payroll.
Keep me posted if there's anything else you need about payroll. I'm still here to help you further. Just add a comment below.