Thanks for sharing your concern about local taxes in the QuickBooks Community page, @KLMPermier. I'd be glad to share more info about this.
Local taxes are payroll taxes employees and/or employers must pay in several states. I agree with FishingForAnswers on where local taxes should appear on employees' paystubs as long as local taxes are properly set up as payroll items, they should show under Taxes.
To know more about setting up local taxes in QuickBooks Desktop Payroll, you can check out this article: How to set up local tax withholding for your company and employees.
Please let me know if you have additional questions about local taxes. I'll be here to assist you further.