Pass along a Stop Payment Fee to a customer after their payment didn't go through

It's good to have you here in the QuickBooks Community, @michaelfaulkner. I'd be delighted to assist you in sorting out this issue about stop payment fee in QuickBooks Desktop. 

For the original invoice and payment, you can void or delete the original customer payment. Let me guide you on how: 

1. Go to the Customers menu and select Customer Center.
2. Select the Transactions tab.
3. Select Received Payments.
4. Find and open the receipt or payment.
5. Go to the Edit menu and select Delete.
6. Select Save & Close.

For the billing of the stop payment fee to the customer, you’ll want to mark the bill as billable for stop payment fee to the customer. You have the option to mark all expenses as billable from the Preferences page.  

Please see this sample screenshot for reference:

The other option is to mark your bills billable when creating a bill. 

Additionally, you can always run the Transaction List by Vendor report to check the bill status. Then customize to see specific details and memorize the report to save the data. Check out these articles to guide you along the way:

• Understand reports
• Customize reports in QuickBooks Desktop
• Create, access and modify memorized reports
  
  

Feel free to reach out if you have any further questions in managing your transactions in QBDT. Have a good one!