2 of my invoices state Paid (not deposited) as the status. The money was deposited weeks ago. How do I change it to reflect Paid only?

Thank you for dropping your question here in the Community, @mf31.

Let me help you on how to record your two invoices in your QuickBooks Online.

All you have to do is to make a deposit, so it will reflect as paid in your QuickBooks Online. 

Here’s how.

1. Select + New.
2. Select Bank Deposit.
3. From the Account drop-down▼menu, choose the account you want to deposit the money into.
4. Select the box for each payment you want to deposit. You can use your deposit slip as a reference. 
5. Select Save and close. 

You may also check here the article about bank deposit and how to use undeposited funds account in QuickBooks. How to Record Bank Deposits in QuickBooks Online.

Feel free to fill me in if you need further assistance with the bank deposit. I am here to help. Keep safe.