Hello guida95,
I appreciate the details on your post and the troubleshooting steps you did to fix this. There's this possibility that the invoice was damaged and QuickBooks tried to correct it by adding extra positive and negative entries. Thus, another error occurred.
I'd recommend deleting and recreating the invoice. Then, apply the available credits to pay it.
Afterwards, we can run the Verify and Rebuild one last time.
If the same thing happens, you can contact our Customer Support Team. They can review your file and provide additional steps to fix it.
Let us know how this goes so we can review it on our end, too.