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How many entries are we talking about? If the entries are sitting in undeposited funds (UF), then you must have deposited them some other way otherwise your bank account would be short those funds. So, how did you get those funds into your bank account? Did you make additional deposits or ??? Every entry to UF also affected another account like A/R since this is double-entry accounting after all. Therefore, you need to look at each UF entry and the other entry where the funds were deposited into your bank account to figure out how to clear the UF entries.
For example, say you received payment on an invoice that went into UF, but not understanding why it wasn't showing in your bank account, you made a bank deposit in QB and assigned an income account to the deposit. You now have an entry into UF as well as a duplicate entry to income (one from the invoice and one from the deposit). To clear the UF entry, you would need to make an entry that reduces UF and also reduce your income since your income is overstated. To do that, you have a few options: 1) you can make an expense transaction, use UF as the payment account and select your income account as the category or, 2) make a journal entry: debit your income account, credit UF.
If you can provide more info, I can try and assist further.