Thanks for posting to the Community, @jmack2.
You can run a paycheck for the same period. When you create these paychecks, make sure the dates are correct for both the regular paycheck and makeup payment.
Here's how:
- Select Workers on the left menu and go to the Employees tab.
- Click Run payroll and select the pay schedule for the payroll you want to create.
- Select Continue and enter the correct Pay period and Pay date.
- Mark the employee and click Create another check for (employee name).
- Enter the necessary payroll details and click Preview payroll.
- Select Submit payroll.
This way, it will be recorded seamlessly and won't be overtaxed.
I'll add this article as your reference to create a set of paychecks outside of a regular payroll run: Create unscheduled checks in Online Payroll.
I'll wait for your reply below if you have more questions. I'm always here to help. Have a great one!