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What app are you referring to so I can walk you through the detailed steps on how to remove or inactivate your employees.
If you're referring to QuickBooks Desktop, you can inactivate your employees that no longer work for the company. However, you can't them if they have pending transactions or a balance. Inactivating them will not show up on your reports and every time you run payroll.
Here's how:
If you're not paying the employee, for the time being, you can unselect them in the Enter Payroll Information window when you run payroll.
If you're using QuickBooks Online, you can follow the steps in these articles on how to manage your employees:
Any additional information about the app you're using is much appreciated. Feel free to post your reply below if you need more help. You take care and have a great day!