Greetings, brewbro.
I'd be glad to lend a hand in accounting your Square fees via QuickBooks Desktop.
Receive payments for the amount of the sales receipt/invoice, a group with undeposited funds. When funding and fee status are known to make deposits, select your Square payment on the next line of the deposit enter the Square fees as a negative amount and assign to your processing fee expense account.
Here's how:
- Click Banking at the top menu, select Make Deposits.
- In the Payments to Deposits window, select the payment/s that was deposited separately, then OK.
- In the Make Deposits window, on a blank line, select the overstated income account from the From Account column drop-down.
- Enter the negative amount in the Amount column. Make sure the Deposit subtotal is zero.
- Select Save and close.
You can check out this recommended article: https://quickbooks.intuit.com/community/Help-Articles/Understand-how-the-Undeposited-Funds-account-works/m-p/203721.
This will get everything nice and organized in your QuickBooks Desktop account. Let me know if there's anything else you need with accounting your Square fees. Have a good one.